Opal is software for aligning multiple biological sequences.
In benchmark tests, Opal aligns sequences with good accuracy. On DNA, accuracy is similar to that of MAFTT and Muscle; on protein, accuracy is similar to MAFFT, and better than Muscle. Details of the software are available in this paper (from the Proceedings of ISMB 2007).
URL of this page | http://opal.cs.arizona.edu | |
OPAL Software Terms of Use | Please read the terms and accept them before downloading the distribution. | |
Distribution | opal.tgz | |
Citation |
Wheeler, T.J. and Kececioglu, J.D. "Multiple alignment by aligning alignments," Proceedings of the 15th ISCB Conference on Intelligent Systems for Molecular Biology, Bioinformatics 23, i559-i568, 2007. (PDF) |
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Contact | opal _ at _ cs.arizona.edu | |
Authors | Travis Wheeler and John Kececioglu |